PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_06996
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family TCP
Protein Properties Length: 425aa    MW: 44992.5 Da    PI: 10.484
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_06996genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP110.42.7e-34129208166
         TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..............s 66 
                 a+g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+ +akpai+ l+++               
  PEQU_06996 129 ATGRKDRHSKVCTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLMINAKPAIDRLAQLppwrppspsppppaA 208
                 589**************************************************************988776643332220 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.8E-30130193IPR005333Transcription factor, TCP
PROSITE profilePS5136932.746132190IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MAKLFQSATT GIKRSKKKEK KPCSFRSGKH GKRKSSRAGR EGGGGRGGGV GGGAPGSKED  60
SDSAPPEPKR RRTRKRASPN PAASILPLPF LLFRLCLLIG EAAGRHEDRR PGGGGDIVEV  120
QGGGHIVRAT GRKDRHSKVC TAKGLRDRRV RLSAHTAIQF YDVQDRLGYD RPSKAVDWLM  180
INAKPAIDRL AQLPPWRPPS PSPPPPAAAE KPLLSSETAD YASAYGFCSS SSLLPPSLDS  240
DSIADTIKSF FPMTAAASSS YHPAIGGSSS HIEDLSLSLQ SVQDPIFNHQ HNRSAPTHQP  300
IFACAAPLAF DAGSSAWPEP SHRAASWNLV QNQFLTQWGT LQSSNPPSIR AMVDPIALSS  360
ASGHQMQLAA FRPSSNSPAP AFRTAAGEAV GFSGYHVPAR LQGGEEEHGS GVPDAPPSAS  420
SASHH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11220KRSKKKEKK
21933KKPCSFRSGKHGKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010919696.12e-92PREDICTED: transcription factor TCP4-like
RefseqXP_010919706.12e-92PREDICTED: transcription factor TCP4-like
SwissprotQ9MAH83e-70TCP3_ARATH; Transcription factor TCP3
TrEMBLM0SW957e-82M0SW95_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr5P06660_0012e-81(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP58393355
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31070.13e-32TCP domain protein 10